Data Overview
Welcome to the Data Section of the VPE Leaderboard platform. This section provides the tools, documentation, and loaders needed to work with two primary data formats:
Choose the workflow relevant to your data:
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SBML Dataloader
Parse and load biological models in SBML (Systems Biology Markup Language) format. This loader extracts species, reactions, and parameters, preparing them for simulation and analysis.
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Knowledge Graph Dataloader
Import and standardize structured graph datasets such as biomedical or molecular knowledge graphs. Includes preprocessing, normalization, and integration into our evaluation pipelines.
If you're unsure which data format your model fits into, we recommend reviewing both loaders above and their respective notebooks before proceeding. For further questions, reach out to the development team or file an issue on the GitHub repository.